EnrichRBP
Getting Started
Getting Started
Installation
API
EnrichRBP.filesOperation
EnrichRBP.Features
EnrichRBP.featureSelection
EnrichRBP.evaluateClassifiers
EnrichRBP.metricsPlot
EXAMPLES
EnrichRBP basic usage flow
File operation examples
Feature generation examples
Feature selection examples
Evaluating classifiers examples
Performance and data visualization examples
HISTORY
Release History
EnrichRBP
Index
Index
B
|
E
|
G
B
built-in function
EnrichRBP.evaluateClassifiers.evaluateDLclassifers()
EnrichRBP.evaluateClassifiers.evaluateMLclassifers()
EnrichRBP.Features.generateDynamicLMFeatures()
EnrichRBP.Features.generateStaticLMFeatures()
EnrichRBP.Features.generateStructureFeatures()
EnrichRBP.featureSelection.cfs()
EnrichRBP.featureSelection.chiSquare()
EnrichRBP.featureSelection.cife()
EnrichRBP.featureSelection.cmim()
EnrichRBP.featureSelection.disr()
EnrichRBP.featureSelection.fisherScore()
EnrichRBP.featureSelection.fScore()
EnrichRBP.featureSelection.giniIndex()
EnrichRBP.featureSelection.icap()
EnrichRBP.featureSelection.jmi()
EnrichRBP.featureSelection.llL21()
EnrichRBP.featureSelection.lsL21()
EnrichRBP.featureSelection.mifs()
EnrichRBP.featureSelection.mim()
EnrichRBP.featureSelection.mrmr()
EnrichRBP.featureSelection.relief_f()
EnrichRBP.featureSelection.traceRatio()
EnrichRBP.featureSelection.tScore()
EnrichRBP.fileOperation.read_label()
EnrichRBP.filesOperation.read_fasta_file()
EnrichRBP.metricsPlot.barplot()
EnrichRBP.metricsPlot.boxplot()
EnrichRBP.metricsPlot.confusion_matirx_deeplearning()
EnrichRBP.metricsPlot.confusion_matrix_machinelearning()
EnrichRBP.metricsPlot.cross_validation_score()
EnrichRBP.metricsPlot.descrimination_threshold()
EnrichRBP.metricsPlot.det_curve_deeplearning()
EnrichRBP.metricsPlot.det_curve_machinelearning()
EnrichRBP.metricsPlot.learning_curve()
EnrichRBP.metricsPlot.partial_dependence()
EnrichRBP.metricsPlot.pointplot()
EnrichRBP.metricsPlot.precision_recall_curve_deeplearning()
EnrichRBP.metricsPlot.precision_recall_curve_machinelearning()
EnrichRBP.metricsPlot.prediction_error()
EnrichRBP.metricsPlot.roc_curve_deeplearning()
EnrichRBP.metricsPlot.roc_curve_machinelearning()
EnrichRBP.metricsPlot.shap_bar()
EnrichRBP.metricsPlot.shap_beeswarm()
EnrichRBP.metricsPlot.shap_heatmap()
EnrichRBP.metricsPlot.shap_interaction_scatter()
EnrichRBP.metricsPlot.shap_scatter()
EnrichRBP.metricsPlot.shap_waterfall()
EnrichRBP.metricsPlot.sns_heatmap()
EnrichRBP.metricsPlot.violinplot()
E
EnrichRBP.evaluateClassifiers.evaluateDLclassifers()
built-in function
EnrichRBP.evaluateClassifiers.evaluateMLclassifers()
built-in function
EnrichRBP.Features.generateDynamicLMFeatures()
built-in function
EnrichRBP.Features.generateStaticLMFeatures()
built-in function
EnrichRBP.Features.generateStructureFeatures()
built-in function
EnrichRBP.featureSelection.cfs()
built-in function
EnrichRBP.featureSelection.chiSquare()
built-in function
EnrichRBP.featureSelection.cife()
built-in function
EnrichRBP.featureSelection.cmim()
built-in function
EnrichRBP.featureSelection.disr()
built-in function
EnrichRBP.featureSelection.fisherScore()
built-in function
EnrichRBP.featureSelection.fScore()
built-in function
EnrichRBP.featureSelection.giniIndex()
built-in function
EnrichRBP.featureSelection.icap()
built-in function
EnrichRBP.featureSelection.jmi()
built-in function
EnrichRBP.featureSelection.llL21()
built-in function
EnrichRBP.featureSelection.lsL21()
built-in function
EnrichRBP.featureSelection.mifs()
built-in function
EnrichRBP.featureSelection.mim()
built-in function
EnrichRBP.featureSelection.mrmr()
built-in function
EnrichRBP.featureSelection.relief_f()
built-in function
EnrichRBP.featureSelection.traceRatio()
built-in function
EnrichRBP.featureSelection.tScore()
built-in function
EnrichRBP.fileOperation.read_label()
built-in function
EnrichRBP.filesOperation.read_fasta_file()
built-in function
EnrichRBP.metricsPlot.barplot()
built-in function
EnrichRBP.metricsPlot.boxplot()
built-in function
EnrichRBP.metricsPlot.confusion_matirx_deeplearning()
built-in function
EnrichRBP.metricsPlot.confusion_matrix_machinelearning()
built-in function
EnrichRBP.metricsPlot.cross_validation_score()
built-in function
EnrichRBP.metricsPlot.descrimination_threshold()
built-in function
EnrichRBP.metricsPlot.det_curve_deeplearning()
built-in function
EnrichRBP.metricsPlot.det_curve_machinelearning()
built-in function
EnrichRBP.metricsPlot.learning_curve()
built-in function
EnrichRBP.metricsPlot.partial_dependence()
built-in function
EnrichRBP.metricsPlot.pointplot()
built-in function
EnrichRBP.metricsPlot.precision_recall_curve_deeplearning()
built-in function
EnrichRBP.metricsPlot.precision_recall_curve_machinelearning()
built-in function
EnrichRBP.metricsPlot.prediction_error()
built-in function
EnrichRBP.metricsPlot.roc_curve_deeplearning()
built-in function
EnrichRBP.metricsPlot.roc_curve_machinelearning()
built-in function
EnrichRBP.metricsPlot.shap_bar()
built-in function
EnrichRBP.metricsPlot.shap_beeswarm()
built-in function
EnrichRBP.metricsPlot.shap_heatmap()
built-in function
EnrichRBP.metricsPlot.shap_interaction_scatter()
built-in function
EnrichRBP.metricsPlot.shap_scatter()
built-in function
EnrichRBP.metricsPlot.shap_waterfall()
built-in function
EnrichRBP.metricsPlot.sns_heatmap()
built-in function
EnrichRBP.metricsPlot.violinplot()
built-in function
G
generateBPFeatures() (EnrichRBP.Features method)